About Preventive Genomics

Preventive Health Management informed by Genomics

What is genomics and genomic testing

Human health and disease are determined by a set of unique genetic makeup, termed the ‘genome’, that each person is born with. A genome consists of approximately 25,000 genes. Genetics is the study of single genes, whereas genomics is the study of multiple genes and their interactions; although the two terms are often used interchangeably.

A gene contains both coding and non-coding parts. The coding part of the gene is translated into building blocks of the body (proteins). Although our understanding on the non-coding part of a gene is much more limited than the coding part, increasingly scientists have found they also play a part in human health and disease.

Traditional genetic testing decodes predominantly the coding part of one gene at a time. Genomic testing utilises a new technology called Next Generation Sequencing and has the capacity of decoding multiple genes in parallel at once, ranging from a panel of genes, to the entire coding parts of 25,000 genes (termed ‘whole exome sequencing’, WES), or the entire coding and non-coding parts of genome (termed ‘whole genome sequencing’, WGS).

The most widely accessible form of genomic testing is panel-based testing, which is a time- and cost-efficient way of testing for a specific purpose. On the other hand, WES/WGS throws a much wider net, may be used for multiple purposes, and has an additional benefit over panel testing of re-analysis of sequencing data when new questions arise at a later time. WES/WGS therefore has a lifelong value with its legacy potentially lasting into future generations (read Patient Story on the ultimate use of genomics).    

Insights: Preventive genomics could be the right test for you if you are a healthy and proactive adult wishing to optimise your health

What is preventive genomics?

'Genomics' is the study of a person's genes and how it relates to their health and disease. Conventionally, genomic testing is predominantly used for diagnostic purposes in someone who already has symptoms. 'Preventive Genomics' is an innovative use of genomic testing, aiming to proactively identify hidden genetic risks in healthy adults, and address these genetic risks before symptoms develop, to prevent or delay the onset of illness for themselves, as well as to inform reproductive and genetic risks to their (future) children and other biological relatives. Once a genetic predisposition is identified, reproductive options may be considered by those at an increased reproductive risk. 

MGA provides a preventive genomics model of care similar to other renowned centres in the US (e.g. Massachusetts General Hospital, Brigham and Women’s Hospital, Boston), representing one of its kind in Australia and the Southern Hemisphere.

Who may benefit from preventive genomics?

  • Any adults who are proactive with their health, and would like to take evidence-based preventive measures to address any underlying genetic risk
  • Adults who have no knowledge of their biological family history
  • Couples planning to start a family
  • Company executives seeking to optimise their health
  • Adult individuals wishing to leave their genomics legacy to their children

What is the process like?

Genomic testing is done through a DNA sample via a cheek swab taken in the clinic. Discussions about the pros and cons of testing and what testing results may mean to a person, their (future) children, and the wider family, will take place prior to testing to help the person make an informed decision. DNA samples are then securely shipped to an appropriately accredited genomic laboratory for testing. 

The laboratory analyses genetic variants (genetic changes) in genes that are known to have an actionable impact. A genetic report is issued in approximately 3 months. 

The genetic reports are first reviewed by the MGA Clinical Geneticist for clinical interpretation and liaison with the laboratory for additional information if needed. Reports are then returned in a follow-up appointment by a genetics health professional who will discuss personal and familial implications ensuring all questions and concerns are answered/addressed. A detailed care plan, including any relevant risk management, is discussed with the person and returned to their general practitioner, with onward referrals made to relevant specialists if needed. 

What conditions does preventive genomics test for?

The genes tested include those that predict major cardiac disorders (e.g. cardiomyopathy – anomalies of heart muscles/conduction), certain cancers (e.g. breast, ovarian, uterine, prostate, bowel), heritable diabetes, drug response (pharmacogenomics), and reproductive carrier risks. Testing can be customised based on each person's unique circumstance, stage of life, and personal/family history, and can range from comprehensive to tailored testing.

Generally only conditions with strong genetic predispositions, as well as those with available evidence-based and effective prevention, risk management and screening options, are included in the testing at the moment. In the future, testing for more common conditions with minor, non-heritable, genetic contributions (polygenic risk scores), such as coronary artery disease, type 1 or type 2 diabetes, late-onset cancers, may become available to guide personal health management with limited familial implications. 

Neurodegenerative disorders, such as early-onset dementia, are not included in preventive genomics testing, but can be considered in a diagnostic test in someone who already has symptoms.

Why should people consider preventive genomics?

Prevention is better than treatment. Research has shown that 1 in 75 people carries a heightened genetic risk for familial hypercholesterolaemia and certain cancers, that they had no prior knowledge or family history of.

Knowing about one’s underlying genetic predisposition allows a person to make informed decisions about their health, lifestyle choices, as well as life, career, and /or family planning. It may also have implications to the wider family.

Screening and early detection of symptoms associated with the identified genetic risk will also lead to better treatment outcomes, and may open up new/targeted treatment options, as well as other preventive opportunities (read How Genomics Supports Disease Prevention).   

Once a 'preventive genome' has been sequenced in a person, data are stored securely in the laboratory (can be released to the person upon request), and can be re-analysed in the future, for the following purposes:

  • Diagnosis if other symptoms develop
  • Precision treatment tailored to the specific genetic variants and molecular pathways
  • Serving as a genomic legacy that may help provide genetic explanations for future generations

How Genomics Supports Disease Prevention

The WHO defines prevention as ‘approaches and activities aimed at reducing the likelihood that a disease or disorder will affect an individual, interrupting or slowing the progress of the disorder or reducing disability’.

Primary Prevention

Focuses on reducing risk factors to prevent a disease or disorder before it arises. This includes identifying and addressing biomedical risk factors such as genetic predispositions before onset of symptoms.

Secondary Prevention

Focuses on the early detection and best practice management of a disorder that is informed by genomics, to reduce deterioration and long-term effects. This includes early diagnosis through the use of genomics, allowing targeted management tailored to each person’s DNA, as well as screening for other complications and co-morbidities associated with the implicated genetic risk factor.

Tertiary Prevention

Focuses on reducing harms in people affected by a genetic disorder and minimising their functional impairment. This includes management of co-morbidities, complications and associated disabilities, informed by genomics.

Quaternary Prevention

Focuses on reducing harms caused by medical interventions for a disease or disorder. Such harm can be minimised by using genomics to guide treatment or circumvent invasive investigations or procedures.
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